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  5. Sobic.008G014500.3

Sobic.008G014500.3


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0007011 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007011_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G014500.3
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G014500.3
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_234
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_196


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 174 252
IPR035979 RBD_domain_sf SUPERFAMILY 94 237
IPR000504 RRM_dom ProSiteProfiles 97 171
IPR000504 RRM_dom ProSiteProfiles 173 254
IPR035979 RBD_domain_sf SUPERFAMILY 263 349
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 23 173
IPR000504 RRM_dom Pfam 99 165
IPR000504 RRM_dom Pfam 269 336
IPR000504 RRM_dom Pfam 175 240
IPR000504 RRM_dom SMART 268 340
IPR000504 RRM_dom SMART 98 167
IPR000504 RRM_dom SMART 174 250
IPR000504 RRM_dom ProSiteProfiles 267 344
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 253 354

No CAZYmes available for this sequence

No external refs found!