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  5. Sobic.008G014801.1

Sobic.008G014801.1


Description : SLOW GROWTH 1


Gene families : OG_01_0008405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008405_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G014801.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G014801.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_100
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036236 Znf_C2H2_sf SUPERFAMILY 570 611
IPR013087 Znf_C2H2_type ProSitePatterns 774 798
IPR036236 Znf_C2H2_sf SUPERFAMILY 595 644
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 136 170
IPR013087 Znf_C2H2_type ProSiteProfiles 772 798
IPR013087 Znf_C2H2_type ProSiteProfiles 614 644
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 334 364
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 268 298
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 66 100
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 299 333
IPR013087 Znf_C2H2_type ProSitePatterns 587 609
IPR013087 Znf_C2H2_type ProSitePatterns 559 581
IPR013087 Znf_C2H2_type ProSiteProfiles 585 614
IPR002885 Pentatricopeptide_rpt Pfam 169 193
IPR002885 Pentatricopeptide_rpt Pfam 373 397
IPR002885 Pentatricopeptide_rpt Pfam 200 229
IPR002885 Pentatricopeptide_rpt Pfam 141 164
IPR013087 Znf_C2H2_type ProSitePatterns 653 675
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 198 232
IPR013087 Znf_C2H2_type ProSitePatterns 743 766
IPR013087 Znf_C2H2_type ProSiteProfiles 741 771
IPR013087 Znf_C2H2_type ProSiteProfiles 557 584
IPR013087 Znf_C2H2_type ProSiteProfiles 651 675
IPR011990 TPR-like_helical_dom_sf Gene3D 1 128
IPR011990 TPR-like_helical_dom_sf Gene3D 270 567
IPR036236 Znf_C2H2_sf SUPERFAMILY 726 783
IPR013087 Znf_C2H2_type ProSitePatterns 685 708
IPR013087 Znf_C2H2_type SMART 651 675
IPR013087 Znf_C2H2_type SMART 614 639
IPR013087 Znf_C2H2_type SMART 683 708
IPR013087 Znf_C2H2_type SMART 772 798
IPR013087 Znf_C2H2_type SMART 511 533
IPR013087 Znf_C2H2_type SMART 585 609
IPR013087 Znf_C2H2_type SMART 711 732
IPR013087 Znf_C2H2_type SMART 557 579
IPR013087 Znf_C2H2_type SMART 741 766
IPR002885 Pentatricopeptide_rpt TIGRFAM 141 164
IPR002885 Pentatricopeptide_rpt TIGRFAM 200 233
IPR002885 Pentatricopeptide_rpt TIGRFAM 273 298
IPR002885 Pentatricopeptide_rpt TIGRFAM 336 363
IPR002885 Pentatricopeptide_rpt TIGRFAM 301 335
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 147 465
IPR013087 Znf_C2H2_type Pfam 585 609
IPR013087 Znf_C2H2_type Pfam 651 675
IPR002885 Pentatricopeptide_rpt Pfam 298 346
IPR013087 Znf_C2H2_type ProSitePatterns 616 639
IPR011990 TPR-like_helical_dom_sf Gene3D 129 256

No CAZYmes available for this sequence

No external refs found!