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  5. Sobic.008G017800.1

Sobic.008G017800.1


Description : alpha-L-arabinofuranosidase 1


Gene families : OG_01_0000348 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000348_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G017800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G017800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_201
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_83


Type GO Term Name Evidence Source
BP GO:0046373 L-arabinose metabolic process ISM GOs from InterProScan
MF GO:0046556 alpha-L-arabinofuranosidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 208 542
IPR013780 Glyco_hydro_b Gene3D 531 646
IPR010720 Alpha-L-AF_C SMART 454 639
IPR008979 Galactose-bd-like_sf SUPERFAMILY 72 228
IPR010720 Alpha-L-AF_C Pfam 455 639
HMM Family HMM Length Query Length e-Value Query Start Query End
GH51 630 657 3.7e-102 176 646
No external refs found!