Sobic.008G030700.1

Description : lipid transfer protein 1

Gene families : OG_01_0000565 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000565_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G030700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G030700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_229
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_103

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036312	Bifun_inhib/LTP/seed_sf	SUPERFAMILY	31	122
IPR016140	Bifunc_inhib/LTP/seed_store	SMART	34	119
IPR036312	Bifun_inhib/LTP/seed_sf	Gene3D	31	123
IPR016140	Bifunc_inhib/LTP/seed_store	Pfam	34	119
IPR000528	Plant_nsLTP	PRINTS	75	90
IPR000528	Plant_nsLTP	PRINTS	92	109
IPR000528	Plant_nsLTP	PRINTS	54	68
IPR000528	Plant_nsLTP	PRINTS	110	121
IPR000528	Plant_nsLTP	PRINTS	33	49
IPR000528	Plant_nsLTP	ProSitePatterns	101	122
IPR000528	Plant_nsLTP	PANTHER	1	121

No CAZYmes available for this sequence

External Links

No external refs found!