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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0002693 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002693_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G047800.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G047800.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_101 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_195 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR021772 | WDR48/Bun107 | Pfam | 608 | 754 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 55 | 69 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 103 | 117 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 276 | 290 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 215 | 256 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 257 | 298 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 33 | 451 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 214 | 483 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 127 | 162 |
| IPR001680 | WD40_rpt | SMART | 250 | 289 |
| IPR001680 | WD40_rpt | SMART | 292 | 331 |
| IPR001680 | WD40_rpt | SMART | 120 | 160 |
| IPR001680 | WD40_rpt | SMART | 208 | 247 |
| IPR001680 | WD40_rpt | SMART | 73 | 116 |
| IPR001680 | WD40_rpt | SMART | 19 | 68 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 276 | 290 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 26 | 213 |
| IPR001680 | WD40_rpt | Pfam | 216 | 247 |
| IPR001680 | WD40_rpt | Pfam | 294 | 329 |
| IPR001680 | WD40_rpt | Pfam | 34 | 67 |
| IPR001680 | WD40_rpt | Pfam | 121 | 160 |
| IPR001680 | WD40_rpt | Pfam | 254 | 289 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 52 | 77 |
No CAZYmes available for this sequence
| No external refs found! |