Sobic.008G052200.1

Description : beta galactosidase 9

Gene families : OG_01_0001176 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001176_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G052200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G052200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_323
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_152

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	ISM	GOs from InterProScan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001944	Glycoside_Hdrlase_35	PRINTS	100	118
IPR001944	Glycoside_Hdrlase_35	PRINTS	713	729
IPR001944	Glycoside_Hdrlase_35	PRINTS	79	96
IPR001944	Glycoside_Hdrlase_35	PRINTS	212	227
IPR001944	Glycoside_Hdrlase_35	PRINTS	155	174
IPR001944	Glycoside_Hdrlase_35	PRINTS	686	700
IPR001944	Glycoside_Hdrlase_35	PRINTS	348	364
IPR001944	Glycoside_Hdrlase_35	PRINTS	291	306
IPR001944	Glycoside_Hdrlase_35	PRINTS	328	343
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	66	385
IPR043159	Lectin_gal-bd_sf	Gene3D	825	917
IPR000922	Lectin_gal-bd_dom	ProSiteProfiles	826	911
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	456	639
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	651	817
IPR019801	Glyco_hydro_35_CS	ProSitePatterns	214	226
IPR041392	GHD	Pfam	393	472
IPR031330	Gly_Hdrlase_35_cat	Pfam	76	380
IPR001944	Glycoside_Hdrlase_35	PANTHER	68	904
IPR000922	Lectin_gal-bd_dom	Pfam	834	910

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH35	307	924	5.6e-111	76	379

External Links

No external refs found!