Sobic.008G052500.1

Description : Leucine-rich repeat protein kinase family protein

Gene families : OG_01_0000052 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000052_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G052500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G052500.1	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_165

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032675	LRR_dom_sf	Gene3D	208	278
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	889	901
IPR032675	LRR_dom_sf	Gene3D	454	707
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	Pfam	773	973
IPR032675	LRR_dom_sf	Gene3D	279	453
IPR001611	Leu-rich_rpt	Pfam	187	247
IPR001611	Leu-rich_rpt	Pfam	607	664
IPR000719	Prot_kinase_dom	SMART	769	1051
IPR013210	LRR_N_plant-typ	Pfam	43	81
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	775	797
IPR000719	Prot_kinase_dom	ProSiteProfiles	769	1051
IPR001611	Leu-rich_rpt	ProSiteProfiles	629	652
IPR032675	LRR_dom_sf	Gene3D	42	207
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	409	433
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	137	161
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	557	581
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	234	258
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	509	533
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	361	385
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	185	209
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	651	676
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	627	650
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	749	1043

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.008G052500.1

Expression Profile

Co-expression Networks

Functional Annotation