Sobic.008G055500.1

Description : protein tyrosine phosphatase 1

Gene families : OG_01_0003341 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003341_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G055500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G055500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_301
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_203

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	None	Extended
MF	GO:0004725	protein tyrosine phosphatase activity	ISM	GOs from InterProScan
BP	GO:0006470	protein dephosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016311	dephosphorylation	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	ISM	GOs from InterProScan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000387	Tyr_Pase_dom	ProSiteProfiles	260	317
IPR003595	Tyr_Pase_cat	SMART	224	325
IPR029021	Prot-tyrosine_phosphatase-like	Gene3D	49	333
IPR016130	Tyr_Pase_AS	ProSitePatterns	263	273
IPR000242	PTP_cat	SMART	70	328
IPR000242	PTP_cat	PRINTS	309	319
IPR000242	PTP_cat	PRINTS	140	160
IPR000242	PTP_cat	PRINTS	122	129
IPR000242	PTP_cat	PRINTS	223	240
IPR000242	PTP_cat	PRINTS	293	308
IPR000242	PTP_cat	PRINTS	260	278
IPR000242	PTP_cat	Pfam	95	324
IPR000242	PTP_cat	ProSiteProfiles	71	326
IPR029021	Prot-tyrosine_phosphatase-like	SUPERFAMILY	41	330

No CAZYmes available for this sequence

External Links

No external refs found!