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  5. Sobic.008G057000.1

Sobic.008G057000.1


Description : SWITCH/sucrose nonfermenting 3C


Gene families : OG_01_0004978 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004978_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G057000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G057000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_187


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017884 SANT_dom ProSiteProfiles 419 470
IPR017930 Myb_dom Pfam 423 465
IPR036388 WH-like_DNA-bd_sf Gene3D 194 281
IPR001005 SANT/Myb ProSiteProfiles 416 466
IPR001005 SANT/Myb SMART 420 468
IPR032451 SMARCC_C Pfam 586 659
IPR007526 SWIRM ProSiteProfiles 188 287
IPR009057 Homeobox-like_sf SUPERFAMILY 188 281
IPR009057 Homeobox-like_sf SUPERFAMILY 421 477
IPR007526 SWIRM Pfam 191 278
IPR001005 SANT/Myb CDD 423 465

No CAZYmes available for this sequence

No external refs found!