Sobic.008G057100.1


Description : Eukaryotic aspartyl protease family protein


Gene families : OG_01_0001171 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001171_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G057100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G057100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_352


Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR001969 Aspartic_peptidase_AS ProSitePatterns 81 92
IPR001969 Aspartic_peptidase_AS ProSitePatterns 283 294
IPR021109 Peptidase_aspartic_dom_sf Gene3D 244 422
IPR001461 Aspartic_peptidase_A1 PANTHER 31 420
IPR021109 Peptidase_aspartic_dom_sf Gene3D 41 240
IPR032799 TAXi_C Pfam 282 412
IPR032861 TAXi_N Pfam 66 240
IPR001461 Aspartic_peptidase_A1 PRINTS 389 404
IPR001461 Aspartic_peptidase_A1 PRINTS 72 92
IPR001461 Aspartic_peptidase_A1 PRINTS 283 294
IPR033121 PEPTIDASE_A1 ProSiteProfiles 66 413
IPR021109 Peptidase_aspartic_dom_sf SUPERFAMILY 59 421

No CAZYmes available for this sequence

No external refs found!