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  5. Sobic.008G057600.1

Sobic.008G057600.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0038033 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0038033_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G057600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G057600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_209
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_131


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 530 570
IPR001680 WD40_rpt ProSiteProfiles 570 604
IPR019775 WD40_repeat_CS ProSitePatterns 548 562
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 517 783
IPR040324 WDR44/Dgr2 PANTHER 4 861
IPR001680 WD40_rpt Pfam 566 603
IPR001680 WD40_rpt Pfam 419 452
IPR001680 WD40_rpt Pfam 525 561
IPR020472 G-protein_beta_WD-40_rep PRINTS 590 604
IPR020472 G-protein_beta_WD-40_rep PRINTS 548 562
IPR020472 G-protein_beta_WD-40_rep PRINTS 440 454
IPR001680 WD40_rpt ProSiteProfiles 421 454
IPR001680 WD40_rpt SMART 564 603
IPR001680 WD40_rpt SMART 414 453
IPR001680 WD40_rpt SMART 605 644
IPR001680 WD40_rpt SMART 697 738
IPR001680 WD40_rpt SMART 523 561
IPR001680 WD40_rpt SMART 660 696
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 393 470
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 414 746

No CAZYmes available for this sequence

No external refs found!