Sobic.008G069200.1

Description : K-box region and MADS-box transcription factor family protein

Gene families : OG_01_0112252 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0112252_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G069200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G069200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_186
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_184

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036879	TF_MADSbox_sf	SUPERFAMILY	65	124
IPR002100	TF_MADSbox	ProSiteProfiles	65	128
IPR002100	TF_MADSbox	SMART	65	127
IPR002100	TF_MADSbox	Pfam	77	121
IPR036879	TF_MADSbox_sf	Gene3D	78	138

No CAZYmes available for this sequence

External Links

No external refs found!