Sobic.008G073300.1

Description : SNARE-like superfamily protein

Gene families : OG_01_0001101 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001101_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G073300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G073300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_248
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_147

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006897	endocytosis	None	Extended
BP	GO:0006898	receptor-mediated endocytosis	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	ISM	GOs from InterProScan
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030122	AP-2 adaptor complex	ISM	GOs from InterProScan
CC	GO:0030131	clathrin adaptor complex	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0035615	clathrin adaptor activity	ISM	GOs from InterProScan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072583	clathrin-dependent endocytosis	ISM	GOs from InterProScan
BP	GO:0098657	import into cell	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
MF	GO:0140312	cargo adaptor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016635	AP_complex_ssu	PIRSF	1	142
IPR016635	AP_complex_ssu	PANTHER	2	142
IPR011012	Longin-like_dom_sf	SUPERFAMILY	1	136
IPR022775	AP_mu_sigma_su	Pfam	1	141
IPR027156	APS2	CDD	1	141

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.008G073300.1

Expression Profile

Co-expression Networks

Functional Annotation