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  5. Sobic.008G088842.1

Sobic.008G088842.1


Description : relative of early flowering 6


Gene families : OG_01_0005084 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005084_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G088842.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G088842.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036236 Znf_C2H2_sf SUPERFAMILY 1362 1406
IPR013087 Znf_C2H2_type SMART 1382 1408
IPR013087 Znf_C2H2_type SMART 1299 1321
IPR013087 Znf_C2H2_type SMART 1352 1376
IPR013087 Znf_C2H2_type SMART 1322 1346
IPR003349 JmjN Pfam 19 52
IPR013087 Znf_C2H2_type ProSiteProfiles 1382 1413
IPR003347 JmjC_dom SMART 195 364
IPR013087 Znf_C2H2_type ProSitePatterns 1354 1376
IPR013087 Znf_C2H2_type ProSiteProfiles 1352 1381
IPR003347 JmjC_dom ProSiteProfiles 195 364
IPR013087 Znf_C2H2_type ProSiteProfiles 1322 1351
IPR003349 JmjN SMART 17 58
IPR003349 JmjN ProSiteProfiles 18 59
IPR013087 Znf_C2H2_type ProSitePatterns 1384 1408
IPR013087 Znf_C2H2_type ProSitePatterns 1324 1346
IPR003347 JmjC_dom Pfam 228 346

No CAZYmes available for this sequence

No external refs found!