Sobic.008G093000.1

Description : ABC transporter family protein

Gene families : OG_01_0005606 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005606_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G093000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G093000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_220
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	ProSiteProfiles	69	309
IPR003439	ABC_transporter-like_ATP-bd	ProSiteProfiles	380	595
IPR027417	P-loop_NTPase	Gene3D	69	333
IPR003439	ABC_transporter-like_ATP-bd	Pfam	397	527
IPR003439	ABC_transporter-like_ATP-bd	Pfam	87	241
IPR027417	P-loop_NTPase	Gene3D	347	593
IPR027417	P-loop_NTPase	SUPERFAMILY	364	574
IPR017871	ABC_transporter-like_CS	ProSitePatterns	213	227
IPR032781	ABC_tran_Xtn	Pfam	280	352
IPR027417	P-loop_NTPase	SUPERFAMILY	63	316
IPR003593	AAA+_ATPase	SMART	93	295
IPR003593	AAA+_ATPase	SMART	405	572

No CAZYmes available for this sequence

External Links

No external refs found!