Sobic.008G101300.2

Description : RAS associated with diabetes protein 51

Gene families : OG_01_0001633 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001633_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G101300.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G101300.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_236
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127

Type	GO Term	Name	Evidence	Source
MF	GO:0000150	DNA strand exchange activity	ISM	GOs from InterProScan
MF	GO:0000166	nucleotide binding	ISM	GOs from InterProScan
BP	GO:0000724	double-strand break repair via homologous recombination	ISM	GOs from InterProScan
BP	GO:0000725	recombinational repair	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003690	double-stranded DNA binding	ISM	GOs from InterProScan
MF	GO:0003697	single-stranded DNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	ISM	GOs from InterProScan
BP	GO:0006281	DNA repair	ISM	GOs from InterProScan
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031297	replication fork processing	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045005	DNA-templated DNA replication maintenance of fidelity	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902298	cell cycle DNA replication maintenance of fidelity	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1990426	mitotic recombination-dependent replication fork processing	ISM	GOs from InterProScan
BP	GO:1990505	mitotic DNA replication maintenance of fidelity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016467	DNA_recomb/repair_RecA-like	PIRSF	15	352
IPR011941	DNA_recomb/repair_Rad51	TIGRFAM	28	352
IPR010995	DNA_repair_Rad51/TF_NusA_a-hlx	SUPERFAMILY	22	87
IPR003593	AAA+_ATPase	SMART	122	319
IPR020588	RecA_ATP-bd	ProSiteProfiles	101	282
IPR027417	P-loop_NTPase	SUPERFAMILY	104	351
IPR013632	DNA_recomb/repair_Rad51_C	Pfam	87	350
IPR027417	P-loop_NTPase	Gene3D	100	352
IPR020587	RecA_monomer-monomer_interface	ProSiteProfiles	289	352

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.008G101300.2

Expression Profile

Co-expression Networks

Functional Annotation