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  5. Sobic.008G104400.1

Sobic.008G104400.1


Description : DNAJ heat shock N-terminal domain-containing protein


Gene families : OG_01_0012357 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012357_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G104400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G104400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_150
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_129


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type SMART 574 598
IPR013087 Znf_C2H2_type SMART 301 325
IPR001623 DnaJ_domain SMART 11 72
IPR001623 DnaJ_domain CDD 12 69
IPR001623 DnaJ_domain Pfam 13 77
IPR036236 Znf_C2H2_sf SUPERFAMILY 291 343
IPR036869 J_dom_sf Gene3D 9 140
IPR036869 J_dom_sf SUPERFAMILY 9 108
IPR018253 DnaJ_domain_CS ProSitePatterns 57 76
IPR044648 JJJ1_plant PANTHER 8 604
IPR013087 Znf_C2H2_type ProSitePatterns 303 325
IPR013087 Znf_C2H2_type ProSitePatterns 576 598
IPR001623 DnaJ_domain PRINTS 14 32
IPR001623 DnaJ_domain PRINTS 52 72
IPR001623 DnaJ_domain PRINTS 32 47
IPR003604 Matrin/U1-like-C_Znf_C2H2 SMART 298 332
IPR022755 Znf_C2H2_jaz Pfam 301 326
IPR001623 DnaJ_domain ProSiteProfiles 12 80
IPR013087 Znf_C2H2_type ProSiteProfiles 574 603

No CAZYmes available for this sequence

No external refs found!