Sobic.008G118700.1

Description : respiratory burst oxidase homolog B

Gene families : OG_01_0002397 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002397_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G118700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G118700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_90
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004601	peroxidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016209	antioxidant activity	None	Extended
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013130	Fe3_Rdtase_TM_dom	Pfam	404	560
IPR002048	EF_hand_dom	SMART	241	269
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	250	262
IPR039261	FNR_nucleotide-bd	SUPERFAMILY	731	904
IPR013623	NADPH_Ox	Pfam	142	240
IPR011992	EF-hand-dom_pair	SUPERFAMILY	169	312
IPR013112	FAD-bd_8	Pfam	606	726
IPR002048	EF_hand_dom	ProSiteProfiles	237	272
IPR039261	FNR_nucleotide-bd	Gene3D	724	916
IPR017927	FAD-bd_FR_type	ProSiteProfiles	598	729
IPR002048	EF_hand_dom	CDD	241	303
IPR017938	Riboflavin_synthase-like_b-brl	SUPERFAMILY	604	724
IPR013121	Fe_red_NAD-bd_6	Pfam	733	898
IPR000778	Cyt_b245_heavy_chain	PRINTS	450	468
IPR000778	Cyt_b245_heavy_chain	PRINTS	715	728
IPR000778	Cyt_b245_heavy_chain	PRINTS	738	755
IPR000778	Cyt_b245_heavy_chain	PRINTS	543	563

No CAZYmes available for this sequence

External Links

No external refs found!