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  5. Sobic.008G132200.1

Sobic.008G132200.1


Description : tetratricopeptide repeat (TPR)-containing protein


Gene families : OG_01_0006910 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006910_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G132200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G132200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_248
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 568 712
IPR019734 TPR_repeat SMART 324 357
IPR019734 TPR_repeat SMART 674 707
IPR019734 TPR_repeat SMART 570 603
IPR019734 TPR_repeat SMART 445 478
IPR019734 TPR_repeat SMART 604 637
IPR011990 TPR-like_helical_dom_sf Gene3D 29 242
IPR011990 TPR-like_helical_dom_sf Gene3D 260 565
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 428 700
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 203 466
IPR043376 NPG1-like PANTHER 32 714

No CAZYmes available for this sequence

No external refs found!