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  5. Sobic.008G170600.1

Sobic.008G170600.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0008555 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008555_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G170600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G170600.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 216 329
IPR011990 TPR-like_helical_dom_sf Gene3D 67 215
IPR002885 Pentatricopeptide_rpt TIGRFAM 367 391
IPR002885 Pentatricopeptide_rpt TIGRFAM 159 186
IPR002885 Pentatricopeptide_rpt TIGRFAM 295 328
IPR002885 Pentatricopeptide_rpt TIGRFAM 189 212
IPR002885 Pentatricopeptide_rpt Pfam 189 212
IPR002885 Pentatricopeptide_rpt Pfam 159 186
IPR002885 Pentatricopeptide_rpt Pfam 366 391
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 293 327
IPR011990 TPR-like_helical_dom_sf Gene3D 332 466
IPR002885 Pentatricopeptide_rpt Pfam 293 341
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 156 190

No CAZYmes available for this sequence

No external refs found!