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  5. Sobic.008G172300.1

Sobic.008G172300.1


Description : Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_01_0001054 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001054_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G172300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G172300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_107
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_120


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006845 Pex_N Pfam 58 270
IPR001841 Znf_RING SMART 285 325
IPR017907 Znf_RING_CS ProSitePatterns 301 310
IPR013083 Znf_RING/FYVE/PHD Gene3D 262 336
IPR001841 Znf_RING ProSiteProfiles 285 326
IPR018957 Znf_C3HC4_RING-type Pfam 285 325

No CAZYmes available for this sequence

No external refs found!