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  5. Sobic.008G178600.1

Sobic.008G178600.1


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG_01_0000689 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000689_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G178600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G178600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
BP GO:0006952 defense response ISM GOs from InterProScan
MF GO:0043531 ADP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR042197 Apaf_helical Gene3D 372 457
IPR027417 P-loop_NTPase SUPERFAMILY 201 473
IPR032675 LRR_dom_sf Gene3D 602 974
IPR027417 P-loop_NTPase Gene3D 197 364
IPR032675 LRR_dom_sf Gene3D 975 1236
IPR036388 WH-like_DNA-bd_sf Gene3D 458 548
IPR002182 NB-ARC Pfam 223 460
IPR032675 LRR_dom_sf Gene3D 1244 1425
IPR041118 Rx_N Pfam 13 93
IPR044974 Disease_R_plants PANTHER 7 1301

No CAZYmes available for this sequence

No external refs found!