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  5. Sobic.008G186900.1

Sobic.008G186900.1


Description : basic pathogenesis-related protein 1


Gene families : OG_01_0047261 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0047261_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G186900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G186900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_87


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001283 CRISP-related PANTHER 84 250
IPR035940 CAP_sf Gene3D 108 250
IPR014044 CAP_domain Pfam 120 238
IPR014044 CAP_domain SMART 113 246
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 233 244
IPR001283 CRISP-related PRINTS 206 222
IPR001283 CRISP-related PRINTS 136 154
IPR001283 CRISP-related PRINTS 233 246
IPR001283 CRISP-related PRINTS 182 195
IPR035940 CAP_sf SUPERFAMILY 108 250

No CAZYmes available for this sequence

No external refs found!