Sobic.009G008000.1

Description : Transcription factor DP

Gene families : OG_01_0006390 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006390_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G008000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G008000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_394
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_21

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051726	regulation of cell cycle	ISM	GOs from InterProScan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR037241	E2F-DP_heterodim	SUPERFAMILY	167	269
IPR036388	WH-like_DNA-bd_sf	Gene3D	66	162
IPR003316	E2F_WHTH_DNA-bd_dom	SMART	69	157
IPR015648	Transcrpt_fac_DP	PANTHER	1	286
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	72	158
IPR014889	Transc_factor_DP_C	SMART	162	288
IPR038168	TF_DP_C_sf	Gene3D	163	284
IPR014889	Transc_factor_DP_C	CDD	167	256
IPR014889	Transc_factor_DP_C	Pfam	166	271
IPR003316	E2F_WHTH_DNA-bd_dom	Pfam	72	157
IPR015648	Transcrpt_fac_DP	PIRSF	6	289

No CAZYmes available for this sequence

External Links

No external refs found!