Sobic.009G022200.1

Description : arginine/serine-rich zinc knuckle-containing protein 33

Gene families : OG_01_0000352 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000352_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G022200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G022200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_242

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001878	Znf_CCHC	ProSiteProfiles	103	118
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	3	85
IPR001878	Znf_CCHC	Pfam	124	140
IPR001878	Znf_CCHC	Pfam	103	118
IPR036875	Znf_CCHC_sf	SUPERFAMILY	94	143
IPR000504	RRM_dom	SMART	12	77
IPR001878	Znf_CCHC	ProSiteProfiles	125	141
IPR001878	Znf_CCHC	SMART	103	119
IPR001878	Znf_CCHC	SMART	125	141
IPR000504	RRM_dom	ProSiteProfiles	11	81
IPR035979	RBD_domain_sf	SUPERFAMILY	9	106
IPR000504	RRM_dom	Pfam	13	74

No CAZYmes available for this sequence

External Links

No external refs found!