Sevir.9G039500.1

Description : EF hand calcium-binding protein family

Gene families : OG_01_0018832 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018832_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G039500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G039500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_132
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	148	160
IPR002048	EF_hand_dom	CDD	139	202
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	186	198
IPR002048	EF_hand_dom	ProSiteProfiles	173	206
IPR011992	EF-hand-dom_pair	SUPERFAMILY	131	202
IPR002048	EF_hand_dom	SMART	139	167
IPR002048	EF_hand_dom	SMART	177	205
IPR002048	EF_hand_dom	Pfam	138	203
IPR002048	EF_hand_dom	ProSiteProfiles	135	170

No CAZYmes available for this sequence

External Links

No external refs found!