Sobic.009G042200.1

Description : DEGP protease 2

Gene families : OG_01_0005447 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005447_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G042200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G042200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_43
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_80

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR009003	Peptidase_S1_PA	SUPERFAMILY	109	313
IPR001940	Peptidase_S1C	PRINTS	250	267
IPR001940	Peptidase_S1C	PRINTS	149	161
IPR001940	Peptidase_S1C	PRINTS	171	191
IPR001940	Peptidase_S1C	PRINTS	272	289
IPR001940	Peptidase_S1C	PRINTS	358	370
IPR041517	DEGP_PDZ	Pfam	426	567
IPR036034	PDZ_sf	Gene3D	321	425
IPR001478	PDZ	Pfam	318	417
IPR001478	PDZ	ProSiteProfiles	305	373
IPR036034	PDZ_sf	SUPERFAMILY	341	429
IPR043504	Peptidase_S1_PA_chymotrypsin	Gene3D	98	205
IPR043504	Peptidase_S1_PA_chymotrypsin	Gene3D	212	320

No CAZYmes available for this sequence

External Links

No external refs found!