Sobic.009G048000.1

Description : villin-like 1

Gene families : OG_01_0002630 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002630_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G048000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G048000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_334
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_187

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0051014	actin filament severing	ISM	GOs from InterProScan
MF	GO:0051015	actin filament binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	613	727
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	511	604
IPR007122	Villin/Gelsolin	PRINTS	462	482
IPR007122	Villin/Gelsolin	PRINTS	525	545
IPR007122	Villin/Gelsolin	PRINTS	585	604
IPR007122	Villin/Gelsolin	PRINTS	637	659
IPR007122	Villin/Gelsolin	PRINTS	404	420
IPR007122	Villin/Gelsolin	PRINTS	429	447
IPR007122	Villin/Gelsolin	PRINTS	321	342
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	250	351
IPR007122	Villin/Gelsolin	PANTHER	2	746
IPR007122	Villin/Gelsolin	SMART	510	599
IPR007122	Villin/Gelsolin	SMART	249	342
IPR007122	Villin/Gelsolin	SMART	615	712
IPR007122	Villin/Gelsolin	SMART	133	230
IPR007122	Villin/Gelsolin	SMART	15	113
IPR007122	Villin/Gelsolin	SMART	385	482
IPR007123	Gelsolin-like_dom	Pfam	147	211
IPR007123	Gelsolin-like_dom	Pfam	26	107
IPR007123	Gelsolin-like_dom	Pfam	404	475
IPR007123	Gelsolin-like_dom	Pfam	265	332
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	134	242
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	3	133
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	374	510

No CAZYmes available for this sequence

External Links

No external refs found!