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  5. Sobic.009G050400.1

Sobic.009G050400.1


Description : Signal transduction histidine kinase, hybrid-type, ethylene sensor


Gene families : OG_01_0002342 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002342_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G050400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G050400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_285
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166


Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0007165 signal transduction ISM GOs from InterProScan
BP GO:0016310 phosphorylation ISM GOs from InterProScan
MF GO:0016772 transferase activity, transferring phosphorus-containing groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036890 HATPase_C_sf Gene3D 407 592
IPR005467 His_kinase_dom ProSiteProfiles 350 589
IPR036890 HATPase_C_sf SUPERFAMILY 397 585
IPR003594 HATPase_C Pfam 455 585
IPR004358 Sig_transdc_His_kin-like_C PRINTS 511 525
IPR004358 Sig_transdc_His_kin-like_C PRINTS 546 564
IPR003661 HisK_dim/P SMART 343 408
IPR003661 HisK_dim/P CDD 343 404
IPR003661 HisK_dim/P Pfam 344 408
IPR036097 HisK_dim/P_sf SUPERFAMILY 329 409
IPR003594 HATPase_C SMART 455 587
IPR003018 GAF Pfam 158 307
IPR003018 GAF SMART 158 317
IPR029016 GAF-like_dom_sf Gene3D 136 308

No CAZYmes available for this sequence

No external refs found!