Sobic.009G050700.1

Description : importin alpha isoform 1

Gene families : OG_01_0001840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001840_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G050700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G050700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_179
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006606	protein import into nucleus	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	ISM	GOs from InterProScan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000225	Armadillo	Pfam	361	400
IPR000225	Armadillo	Pfam	108	148
IPR000225	Armadillo	Pfam	319	359
IPR000225	Armadillo	Pfam	246	273
IPR000225	Armadillo	Pfam	192	233
IPR000225	Armadillo	Pfam	150	189
IPR000225	Armadillo	Pfam	405	442
IPR000225	Armadillo	Pfam	277	315
IPR002652	Importin-a_IBB	ProSiteProfiles	1	58
IPR016024	ARM-type_fold	SUPERFAMILY	10	501
IPR002652	Importin-a_IBB	Pfam	12	97
IPR032413	Arm_3	Pfam	458	503
IPR011989	ARM-like	Gene3D	75	497
IPR024931	Importin_alpha	PIRSF	2	529
IPR000225	Armadillo	ProSiteProfiles	245	287
IPR036975	Importin-a_IBB_sf	Gene3D	11	50
IPR000225	Armadillo	ProSiteProfiles	161	203
IPR000225	Armadillo	SMART	192	233
IPR000225	Armadillo	SMART	361	401
IPR000225	Armadillo	SMART	107	148
IPR000225	Armadillo	SMART	404	444
IPR000225	Armadillo	SMART	150	190
IPR000225	Armadillo	SMART	276	316
IPR000225	Armadillo	SMART	318	359
IPR000225	Armadillo	SMART	235	274
IPR000225	Armadillo	ProSiteProfiles	118	161

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.009G050700.1

Expression Profile

Co-expression Networks

Functional Annotation