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  5. Sobic.009G067700.1

Sobic.009G067700.1


Description : C2H2 type zinc finger transcription factor family


Gene families : OG_01_0032872 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0032872_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G067700.1
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_6


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type ProSiteProfiles 247 274
IPR013087 Znf_C2H2_type ProSitePatterns 74 94
IPR036236 Znf_C2H2_sf SUPERFAMILY 72 226
IPR013087 Znf_C2H2_type ProSiteProfiles 204 231
IPR013087 Znf_C2H2_type ProSitePatterns 206 226
IPR013087 Znf_C2H2_type ProSiteProfiles 72 99
IPR036236 Znf_C2H2_sf SUPERFAMILY 246 276
IPR013087 Znf_C2H2_type ProSitePatterns 249 269
IPR013087 Znf_C2H2_type SMART 72 94
IPR013087 Znf_C2H2_type SMART 247 269
IPR013087 Znf_C2H2_type SMART 204 226
IPR044653 AZF1/2/3-like PANTHER 2 361

No CAZYmes available for this sequence

No external refs found!