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  5. Sobic.009G083400.1

Sobic.009G083400.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0004662 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004662_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G083400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G083400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_234
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_209


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 214 293
IPR000504 RRM_dom ProSiteProfiles 295 375
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 191 295
IPR000504 RRM_dom Pfam 389 455
IPR000504 RRM_dom Pfam 216 284
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 377 481
IPR000504 RRM_dom ProSiteProfiles 387 478
IPR035979 RBD_domain_sf SUPERFAMILY 193 290
IPR000504 RRM_dom SMART 296 371
IPR000504 RRM_dom SMART 215 289
IPR000504 RRM_dom SMART 388 461
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 296 374
IPR035979 RBD_domain_sf SUPERFAMILY 293 455

No CAZYmes available for this sequence

No external refs found!