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  5. Sobic.009G112800.3

Sobic.009G112800.3


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0006779 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006779_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G112800.3
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G112800.3
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_16
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_180


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 533 1016
IPR019775 WD40_repeat_CS ProSitePatterns 1112 1126
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 1056 1332
IPR001680 WD40_rpt Pfam 1090 1124
IPR001680 WD40_rpt SMART 1086 1125
IPR001680 WD40_rpt SMART 1044 1081
IPR011989 ARM-like Gene3D 669 863
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1036 1250
IPR001680 WD40_rpt ProSiteProfiles 1093 1126

No CAZYmes available for this sequence

No external refs found!