Sevir.9G045900.1

Description : elongation factor P (EF-P) family protein

Gene families : OG_01_0003084 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003084_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G045900.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G045900.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_63

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008991	Translation_prot_SH3-like_sf	SUPERFAMILY	152	210
IPR013185	Transl_elong_KOW-like	Pfam	152	206
IPR020599	Transl_elong_fac_P/YeiP	PANTHER	85	332
IPR001059	Transl_elong_P/YeiP_cen	Pfam	217	267
IPR001059	Transl_elong_P/YeiP_cen	SMART	214	268
IPR015365	Elong-fact-P_C	SMART	276	331
IPR014722	Rib_uL2_dom2	Gene3D	150	209
IPR015365	Elong-fact-P_C	Pfam	276	331
IPR015365	Elong-fact-P_C	CDD	276	331
IPR011768	Transl_elongation_fac_P	Hamap	148	332
IPR012340	NA-bd_OB-fold	SUPERFAMILY	212	273
IPR011768	Transl_elongation_fac_P	TIGRFAM	152	332
IPR012340	NA-bd_OB-fold	SUPERFAMILY	276	332
IPR001059	Transl_elong_P/YeiP_cen	CDD	213	273

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.9G045900.1

Expression Profile

Co-expression Networks

Functional Annotation