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  5. Sobic.009G131300.1

Sobic.009G131300.1


Description : phosphate deficiency response 2


Gene families : OG_01_0004935 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004935_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G131300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G131300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_101
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISM GOs from InterProScan
MF GO:0005215 transporter activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018303 ATPase_P-typ_P_site ProSitePatterns 488 494
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 483 666
IPR023214 HAD_sf Gene3D 667 838
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 255 385
IPR001757 P_typ_ATPase TIGRFAM 395 507
IPR006544 P-type_TPase_V TIGRFAM 44 1123
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 167 1143
IPR036412 HAD-like_sf SUPERFAMILY 481 833
IPR044492 P_typ_ATPase_HD_dom SFLD 467 929
IPR023299 ATPase_P-typ_cyto_dom_N SUPERFAMILY 492 676

No CAZYmes available for this sequence

No external refs found!