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  5. Sobic.009G133201.1

Sobic.009G133201.1


Description : phragmoplastin interacting protein 1


Gene families : OG_01_0024768 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0024768_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G133201.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G133201.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036875 Znf_CCHC_sf SUPERFAMILY 381 439
IPR036875 Znf_CCHC_sf SUPERFAMILY 478 520
IPR001878 Znf_CCHC ProSiteProfiles 497 512
IPR001878 Znf_CCHC Pfam 496 512
IPR001878 Znf_CCHC Pfam 544 559
IPR001878 Znf_CCHC ProSiteProfiles 545 559
IPR001878 Znf_CCHC ProSiteProfiles 389 404
IPR001878 Znf_CCHC SMART 388 404
IPR001878 Znf_CCHC SMART 497 513
IPR001878 Znf_CCHC SMART 544 560
IPR001878 Znf_CCHC SMART 421 437
IPR036875 Znf_CCHC_sf SUPERFAMILY 526 562

No CAZYmes available for this sequence

No external refs found!