Sobic.009G133500.2

Description : homolog of yeast autophagy 18 (ATG18) H

Gene families : OG_01_0005464 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005464_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G133500.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G133500.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006914	autophagy	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001680	WD40_rpt	SMART	405	445
IPR001680	WD40_rpt	SMART	466	506
IPR045142	BCAS3-like	PANTHER	47	1048
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	117	509
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	96	587
IPR022175	BCAS3_dom	Pfam	552	797

No CAZYmes available for this sequence

External Links

No external refs found!