Sobic.009G134900.1

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0011187 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011187_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G134900.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G134900.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_100
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	Gene3D	376	504
IPR002885	Pentatricopeptide_rpt	Pfam	254	300
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	253	287
IPR044179	PPR5-like	PANTHER	68	504
IPR011990	TPR-like_helical_dom_sf	Gene3D	106	363
IPR002885	Pentatricopeptide_rpt	Pfam	185	230
IPR002885	Pentatricopeptide_rpt	TIGRFAM	256	289

No CAZYmes available for this sequence

External Links

No external refs found!