Sobic.009G139200.1

Description : DegP protease 10

Gene families : OG_01_0008792 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008792_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G139200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G139200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_121

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001478	PDZ	Pfam	319	419
IPR036034	PDZ_sf	Gene3D	320	423
IPR036034	PDZ_sf	SUPERFAMILY	342	424
IPR009003	Peptidase_S1_PA	SUPERFAMILY	107	312
IPR041517	DEGP_PDZ	Pfam	426	570
IPR001940	Peptidase_S1C	PRINTS	173	193
IPR001940	Peptidase_S1C	PRINTS	252	269
IPR001940	Peptidase_S1C	PRINTS	151	163
IPR001940	Peptidase_S1C	PRINTS	358	370
IPR043504	Peptidase_S1_PA_chymotrypsin	Gene3D	93	208
IPR043504	Peptidase_S1_PA_chymotrypsin	Gene3D	214	319

No CAZYmes available for this sequence

External Links

No external refs found!