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  5. Sobic.009G146800.1

Sobic.009G146800.1


Description : potassium transport 2/3


Gene families : OG_01_0003315 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003315_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G146800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G146800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_10
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_165


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity ISM GOs from InterProScan
MF GO:0005249 voltage-gated potassium channel activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006811 monoatomic ion transport ISM GOs from InterProScan
BP GO:0006813 potassium ion transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045319 KAT/AKT PANTHER 1 681
IPR005821 Ion_trans_dom Pfam 21 168
IPR000595 cNMP-bd_dom CDD 239 352
IPR002110 Ankyrin_rpt Pfam 387 466
IPR002110 Ankyrin_rpt ProSiteProfiles 412 444
IPR002110 Ankyrin_rpt ProSiteProfiles 509 541
IPR036770 Ankyrin_rpt-contain_sf Gene3D 375 473
IPR000595 cNMP-bd_dom ProSiteProfiles 239 358
IPR000595 cNMP-bd_dom Pfam 259 343
IPR002110 Ankyrin_rpt ProSiteProfiles 476 508
IPR018490 cNMP-bd_dom_sf SUPERFAMILY 166 357
IPR000595 cNMP-bd_dom SMART 239 356
IPR021789 KHA_dom ProSiteProfiles 608 695
IPR036770 Ankyrin_rpt-contain_sf Gene3D 474 548
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 387 539
IPR014710 RmlC-like_jellyroll Gene3D 206 370
IPR002110 Ankyrin_rpt SMART 380 408
IPR002110 Ankyrin_rpt SMART 509 538
IPR002110 Ankyrin_rpt SMART 476 505
IPR002110 Ankyrin_rpt SMART 445 474
IPR002110 Ankyrin_rpt SMART 412 441
IPR021789 KHA_dom Pfam 607 677

No CAZYmes available for this sequence

No external refs found!