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  5. Sevir.9G050500.1

Sevir.9G050500.1


Description : VPS35 homolog B


Gene families : OG_01_0011250 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011250_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G050500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G050500.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12


Type GO Term Name Evidence Source
BP GO:0015031 protein transport ISM GOs from InterProScan
CC GO:0030906 retromer, cargo-selective complex ISM GOs from InterProScan
BP GO:0042147 retrograde transport, endosome to Golgi ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005378 Vps35 PANTHER 15 800
IPR005378 Vps35 PIRSF 13 802
IPR042491 Vps35_C Gene3D 476 786
IPR005378 Vps35 Pfam 22 758

No CAZYmes available for this sequence

No external refs found!