Sobic.009G193600.1

Description : Eukaryotic aspartyl protease family protein

Gene families : OG_01_0025147 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025147_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G193600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G193600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_186
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_17

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004190	aspartic-type endopeptidase activity	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070001	aspartic-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032861	TAXi_N	Pfam	76	279
IPR021109	Peptidase_aspartic_dom_sf	Gene3D	65	278
IPR033121	PEPTIDASE_A1	ProSiteProfiles	76	482
IPR021109	Peptidase_aspartic_dom_sf	Gene3D	281	489
IPR032799	TAXi_C	Pfam	306	482
IPR021109	Peptidase_aspartic_dom_sf	SUPERFAMILY	72	486
IPR001969	Aspartic_peptidase_AS	ProSitePatterns	341	352
IPR001461	Aspartic_peptidase_A1	PRINTS	82	102
IPR001461	Aspartic_peptidase_A1	PRINTS	341	352
IPR001461	Aspartic_peptidase_A1	PRINTS	458	473
IPR034161	Pepsin-like_plant	CDD	75	486

No CAZYmes available for this sequence

External Links

No external refs found!