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  5. Sobic.009G210300.1

Sobic.009G210300.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0004354 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004354_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G210300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G210300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
BP GO:0019722 calcium-mediated signaling ISM GOs from InterProScan
MF GO:0019900 kinase binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom Pfam 109 179
IPR002048 EF_hand_dom ProSiteProfiles 150 185
IPR011992 EF-hand-dom_pair SUPERFAMILY 21 204
IPR002048 EF_hand_dom SMART 154 182
IPR002048 EF_hand_dom SMART 110 138
IPR002048 EF_hand_dom SMART 73 101
IPR002048 EF_hand_dom ProSiteProfiles 69 104
IPR002048 EF_hand_dom ProSiteProfiles 106 141
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 163 175
IPR045198 CNBL1-10 PANTHER 1 212
IPR002048 EF_hand_dom CDD 113 180
IPR002048 EF_hand_dom Pfam 75 96

No CAZYmes available for this sequence

No external refs found!