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  5. Sobic.009G216800.1

Sobic.009G216800.1


Description : farnesyl diphosphate synthase 1


Gene families : OG_01_0005649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005649_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G216800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G216800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_128


Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process ISM GOs from InterProScan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 6 352
IPR033749 Polyprenyl_synt_CS ProSitePatterns 235 247
IPR000092 Polyprenyl_synt Pfam 44 307
IPR033749 Polyprenyl_synt_CS ProSitePatterns 101 115
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 19 352
IPR039702 FPS1-like PANTHER 1 353
IPR000092 Polyprenyl_synt CDD 41 351

No CAZYmes available for this sequence

No external refs found!