Sobic.009G241600.1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_01_0018697 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018697_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G241600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G241600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_80
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_432

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000571	Znf_CCCH	SMART	294	321
IPR000571	Znf_CCCH	SMART	256	283
IPR036855	Znf_CCCH_sf	SUPERFAMILY	253	288
IPR000571	Znf_CCCH	ProSiteProfiles	256	284
IPR000571	Znf_CCCH	ProSiteProfiles	294	322
IPR000571	Znf_CCCH	Pfam	258	282
IPR036855	Znf_CCCH_sf	SUPERFAMILY	291	321
IPR045877	ZFP36-like	PANTHER	13	328

No CAZYmes available for this sequence

External Links

No external refs found!