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  5. Sobic.009G250000.1

Sobic.009G250000.1


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0013498 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013498_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G250000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G250000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_229
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_182


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom ProSiteProfiles 219 270
IPR011598 bHLH_dom SMART 225 276
IPR011598 bHLH_dom Pfam 220 271
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 219 285
IPR036638 HLH_DNA-bd_sf Gene3D 211 285
IPR002912 ACT_dom ProSiteProfiles 383 457

No CAZYmes available for this sequence

No external refs found!