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  5. Sobic.009G253101.1

Sobic.009G253101.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000072 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000072_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.009G253101.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.009G253101.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_340
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_71


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 133 168
IPR002885 Pentatricopeptide_rpt Pfam 165 193
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 93 132
IPR002885 Pentatricopeptide_rpt Pfam 117 142
IPR011990 TPR-like_helical_dom_sf Gene3D 23 194
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 169 195
IPR002885 Pentatricopeptide_rpt TIGRFAM 135 170
IPR002885 Pentatricopeptide_rpt TIGRFAM 171 193

No CAZYmes available for this sequence

No external refs found!