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  5. Sobic.010G004500.1

Sobic.010G004500.1


Description : Ankyrin repeat family protein


Gene families : OG_01_0025768 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025768_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G004500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G004500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 337 554
IPR002110 Ankyrin_rpt Pfam 422 482
IPR036770 Ankyrin_rpt-contain_sf Gene3D 397 556
IPR036770 Ankyrin_rpt-contain_sf Gene3D 187 286
IPR002110 Ankyrin_rpt SMART 424 453
IPR002110 Ankyrin_rpt SMART 512 542
IPR002110 Ankyrin_rpt SMART 195 228
IPR002110 Ankyrin_rpt SMART 458 488
IPR002110 Ankyrin_rpt SMART 36 65
IPR002110 Ankyrin_rpt SMART 247 276
IPR002110 Ankyrin_rpt SMART 297 337
IPR002110 Ankyrin_rpt SMART 342 372
IPR002110 Ankyrin_rpt SMART 376 407
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 41 388
IPR002110 Ankyrin_rpt ProSiteProfiles 247 279
IPR002110 Ankyrin_rpt ProSiteProfiles 424 456
IPR026961 PGG_dom Pfam 610 718
IPR036770 Ankyrin_rpt-contain_sf Gene3D 287 396

No CAZYmes available for this sequence

No external refs found!