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  5. Sobic.010G045400.1

Sobic.010G045400.1


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_01_0000365 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000365_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G045400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G045400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_35
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_173


Type GO Term Name Evidence Source
MF GO:0004467 long-chain fatty acid-CoA ligase activity ISM GOs from InterProScan
BP GO:0006631 fatty acid metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000873 AMP-dep_Synth/Lig_com Pfam 45 515
IPR045311 LC-FACS_euk CDD 65 646
IPR020845 AMP-binding_CS ProSitePatterns 218 229
IPR042099 ANL_N_sf Gene3D 32 507

No CAZYmes available for this sequence

No external refs found!