Sobic.010G047000.1

Description : Transport protein particle (TRAPP) component

Gene families : OG_01_0003307 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003307_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G047000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G047000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_147

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030008	TRAPP complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0048193	Golgi vesicle transport	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0099023	vesicle tethering complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016696	TRAPP-I_su5	PIRSF	4	194
IPR024096	NO_sig/Golgi_transp_ligand-bd	SUPERFAMILY	23	192
IPR007194	TRAPP_component	Pfam	30	182
IPR016696	TRAPP-I_su5	PANTHER	1	188
IPR016696	TRAPP-I_su5	CDD	25	182

No CAZYmes available for this sequence

External Links

No external refs found!